1WAR
Recombinant Human Purple Acid Phosphatase expressed in Pichia Pastoris
- PDB DOI: https://doi.org/10.2210/pdb1WAR/pdb
- Classification: HYDROLASE
- Organism(s): Homo sapiens
- Expression System: Komagataella pastoris
- Mutation(s): No
- Deposited: 2004-10-28 Released: 2005-07-06
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.22 Å
- R-Value Free: 0.198
- R-Value Work: 0.138
- R-Value Observed: 0.141
This is version 1.4 of the entry. See complete history.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| HUMAN PURPLE ACID PHOSPHATASE | 310 | Homo sapiens | Mutation(s): 0 EC: 3.1.3.2 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P13686 (Homo sapiens) Explore P13686 Go to UniProtKB: P13686 | |||||
PHAROS: P13686 GTEx: ENSG00000102575 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P13686 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAG Query on NAG | E [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | ||
| PO4 Query on PO4 | D [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | ||
| FE Query on FE | B [auth A], C [auth A] | FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.22 Å
- R-Value Free: 0.198
- R-Value Work: 0.138
- R-Value Observed: 0.141
- Space Group: P 43 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 80.538 | α = 90 |
| b = 80.538 | β = 90 |
| c = 99.998 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2005-07-06 Deposition Author(s): Duff, A.P., Langley, D.B., Han, R., Averill, B.A., Freeman, H.C., Guss, J.M.
Revision History (Full details and data files)
- Version 1.0: 2005-07-06
Type: Initial release - Version 1.1: 2011-07-13
Changes: Advisory, Refinement description, Version format compliance - Version 1.2: 2019-04-03
Changes: Data collection, Derived calculations, Experimental preparation, Other - Version 1.3: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Other, Structure summary - Version 1.4: 2023-12-13
Changes: Data collection, Database references, Refinement description, Structure summary
