2MM4

Structure of a Conserved Golgi Complex-targeting Signal in Coronavirus Envelope Proteins


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 15 
  • Selection Criteria: all calculated structures submitted 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structure of a conserved Golgi complex-targeting signal in coronavirus envelope proteins.

Li, Y.Surya, W.Claudine, S.Torres, J.

(2014) J Biol Chem 289: 12535-12549

  • DOI: https://doi.org/10.1074/jbc.M114.560094
  • Primary Citation of Related Structures:  
    2MM4

  • PubMed Abstract: 

    Coronavirus envelope (CoV E) proteins are ∼100-residue polypeptides with at least one channel-forming α-helical transmembrane (TM) domain. The extramembrane C-terminal tail contains a completely conserved proline, at the center of a predicted β-coil-β motif. This hydrophobic motif has been reported to constitute a Golgi-targeting signal or a second TM domain. However, no structural data for this or other extramembrane domains in CoV E proteins is available. Herein, we show that the E protein in the severe acute respiratory syndrome virus has only one TM domain in micelles, whereas the predicted β-coil-β motif forms a short membrane-bound α-helix connected by a disordered loop to the TM domain. However, complementary results suggest that this motif is potentially poised for conformational change or in dynamic exchange with other conformations.


  • Organizational Affiliation

    From the School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, 637551 Singapore.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Envelope small membrane protein58Severe acute respiratory syndrome-related coronavirusMutation(s): 3 
Gene Names: E
Membrane Entity: Yes 
UniProt
Find proteins for P59637 (Severe acute respiratory syndrome coronavirus)
Explore P59637 
Go to UniProtKB:  P59637
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP59637
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 15 
  • Selection Criteria: all calculated structures submitted 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2014-04-02
    Type: Initial release
  • Version 1.1: 2020-01-01
    Changes: Data collection, Database references
  • Version 1.2: 2023-06-14
    Changes: Database references, Other