Download MendeleyStructure and Functional Studies on Human Mitochondrial Ferredoxins
Webert, H., Hobler, A., Sheftel, A.D., Molik, S., Maestre-Reyna, M., Essen, L.-O., Vorniscescu, D., Keusgen, M., Hannemann, F., Bernhardt, R., Lill, R.To be published.
2Y5C
Structure of human ferredoxin 2 (Fdx2)in complex with 2Fe2S cluster
- PDB DOI: https://doi.org/10.2210/pdb2Y5C/pdb
- Classification: ELECTRON TRANSPORT
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2011-01-12 Released: 2012-02-01
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.201
- R-Value Work: 0.173
- R-Value Observed: 0.174
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| ADRENODOXIN-LIKE PROTEIN, MITOCHONDRIAL | 109 | Homo sapiens | Mutation(s): 0 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q6P4F2 (Homo sapiens) Explore Q6P4F2 Go to UniProtKB: Q6P4F2 | |||||
PHAROS: Q6P4F2 GTEx: ENSG00000267673 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q6P4F2 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FES Query on FES | C [auth A], E [auth B] | FE2/S2 (INORGANIC) CLUSTER Fe2 S2 NIXDOXVAJZFRNF-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | D [auth A], F [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.201
- R-Value Work: 0.173
- R-Value Observed: 0.174
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 51.38 | α = 90 |
| b = 35.45 | β = 105.13 |
| c = 75.51 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| SCALA | data scaling |
| SHELXCDE | phasing |
Entry History
Deposition Data
- Released Date: 2012-02-01 Deposition Author(s): Webert, H., Hobler, A., Sheftel, A.D., Molik, S., Maestre-Reyna, M., Essen, L.-O., Vorniscescu, D., Keusgen, M., Hannemann, F., Bernhardt, R., Lill, R.
Revision History (Full details and data files)
- Version 1.0: 2012-02-01
Type: Initial release
